Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Gm8410-201ENSMUST00000117225 605 ntBASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Gm7063-201ENSMUST00000186840 981 ntBASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Gm28630-201ENSMUST00000187806 498 ntBASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scfd1Q8BRF7 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.02■□□□□ 0.31
Scfd1Q8BRF7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scfd1Q8BRF7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Scfd1Q8BRF7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Scfd1Q8BRF7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scfd1Q8BRF7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Scfd1Q8BRF7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scfd1Q8BRF7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Gm8749-201ENSMUST00000117737 331 ntBASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Gm25144-201ENSMUST00000179561 110 ntBASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Gm25352-201ENSMUST00000179815 110 ntBASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Gm2451-201ENSMUST00000199447 999 ntBASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Gm10290-201ENSMUST00000200451 999 ntBASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Gm45098-201ENSMUST00000207179 657 ntBASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.01■□□□□ 0.31
Scfd1Q8BRF7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Gm16011-201ENSMUST00000121567 2662 ntBASIC17■□□□□ 0.31
Scfd1Q8BRF7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Gm17837-201ENSMUST00000186435 985 ntBASIC17■□□□□ 0.31
Scfd1Q8BRF7 Gm38294-201ENSMUST00000192831 381 ntBASIC17■□□□□ 0.31
Scfd1Q8BRF7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Scfd1Q8BRF7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms