Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smco3Q8BQM7 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smco3Q8BQM7 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smco3Q8BQM7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Smco3Q8BQM7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Gm13436-201ENSMUST00000120418 567 ntBASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smco3Q8BQM7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smco3Q8BQM7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms