Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col16a1Q8BLX7 Gm38319-201ENSMUST00000194537 1266 ntBASIC19.33■□□□□ 0.69
Col16a1Q8BLX7 AC165157.4-201ENSMUST00000220587 139 ntBASIC19.33■□□□□ 0.69
Col16a1Q8BLX7 AC166349.1-201ENSMUST00000220866 695 ntBASIC19.33■□□□□ 0.69
Col16a1Q8BLX7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Col16a1Q8BLX7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col16a1Q8BLX7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col16a1Q8BLX7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col16a1Q8BLX7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col16a1Q8BLX7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col16a1Q8BLX7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col16a1Q8BLX7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Col16a1Q8BLX7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col16a1Q8BLX7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col16a1Q8BLX7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col16a1Q8BLX7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col16a1Q8BLX7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col16a1Q8BLX7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Gm7558-201ENSMUST00000193221 1165 ntBASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Gm45667-201ENSMUST00000210380 1316 ntBASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Gm5303-201ENSMUST00000117943 1252 ntBASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Gm5354-201ENSMUST00000182417 973 ntBASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 AC139580.1-202ENSMUST00000223574 928 ntBASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Col16a1Q8BLX7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Col16a1Q8BLX7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Gm28911-201ENSMUST00000188837 117 ntBASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col16a1Q8BLX7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Mir7654-201ENSMUST00000185082 70 ntBASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 AC121804.3-201ENSMUST00000223420 295 ntBASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col16a1Q8BLX7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms