Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC20.96■□□□□ 0.95
Usp54Q8BL06 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC20.96■□□□□ 0.95
Usp54Q8BL06 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp54Q8BL06 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp54Q8BL06 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.96■□□□□ 0.95
Usp54Q8BL06 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp54Q8BL06 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp54Q8BL06 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Gm14452-201ENSMUST00000118680 1632 ntBASIC20.95■□□□□ 0.94
Usp54Q8BL06 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Usp54Q8BL06 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Usp54Q8BL06 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC20.95■□□□□ 0.94
Usp54Q8BL06 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.95■□□□□ 0.94
Usp54Q8BL06 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp54Q8BL06 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC20.94■□□□□ 0.94
Usp54Q8BL06 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp54Q8BL06 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Gm12960-201ENSMUST00000120017 1066 ntBASIC20.93■□□□□ 0.94
Usp54Q8BL06 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC20.93■□□□□ 0.94
Usp54Q8BL06 AC153872.1-201ENSMUST00000199539 128 ntBASIC20.93■□□□□ 0.94
Usp54Q8BL06 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp54Q8BL06 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Usp54Q8BL06 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp54Q8BL06 AC154527.2-201ENSMUST00000225256 1466 ntBASIC20.92■□□□□ 0.94
Usp54Q8BL06 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp54Q8BL06 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp54Q8BL06 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp54Q8BL06 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp54Q8BL06 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp54Q8BL06 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp54Q8BL06 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp54Q8BL06 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp54Q8BL06 Gm9252-201ENSMUST00000172364 1602 ntBASIC20.92■□□□□ 0.94
Usp54Q8BL06 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp54Q8BL06 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp54Q8BL06 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Gm15806-201ENSMUST00000120696 955 ntBASIC20.91■□□□□ 0.94
Usp54Q8BL06 Gm5279-201ENSMUST00000199575 745 ntBASIC20.91■□□□□ 0.94
Usp54Q8BL06 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp54Q8BL06 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms