Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.63■□□□□ 0.09
Ccdc40Q8BI79 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc40Q8BI79 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Gm6376-201ENSMUST00000209407 580 ntBASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.61■□□□□ 0.09
Ccdc40Q8BI79 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms