Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4bQ8BGE6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Gm9727-201ENSMUST00000161387 555 ntBASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 AW822252-206ENSMUST00000208904 237 ntBASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4bQ8BGE6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Atg4bQ8BGE6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Atg4bQ8BGE6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Atg4bQ8BGE6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Atg4bQ8BGE6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.08□□□□□ -0.16
Atg4bQ8BGE6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atg4bQ8BGE6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atg4bQ8BGE6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms