Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubp1Q811S7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ubp1Q811S7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.75□□□□□ -0.05
Ubp1Q811S7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Celf4-206ENSMUST00000224553 1729 ntBASIC14.75□□□□□ -0.05
Ubp1Q811S7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Gm15467-201ENSMUST00000120582 445 ntBASIC14.75□□□□□ -0.05
Ubp1Q811S7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.75□□□□□ -0.05
Ubp1Q811S7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubp1Q811S7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Gm8000-201ENSMUST00000188378 592 ntBASIC14.74□□□□□ -0.05
Ubp1Q811S7 Gm5264-201ENSMUST00000190584 848 ntBASIC14.74□□□□□ -0.05
Ubp1Q811S7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.74□□□□□ -0.05
Ubp1Q811S7 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.74□□□□□ -0.05
Ubp1Q811S7 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.74□□□□□ -0.05
Ubp1Q811S7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.74□□□□□ -0.05
Ubp1Q811S7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubp1Q811S7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.73□□□□□ -0.05
Ubp1Q811S7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Ubp1Q811S7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubp1Q811S7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubp1Q811S7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ubp1Q811S7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.72□□□□□ -0.05
Ubp1Q811S7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ubp1Q811S7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubp1Q811S7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubp1Q811S7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ubp1Q811S7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms