Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Gm27867-201ENSMUST00000184778 125 ntBASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Grk6-207ENSMUST00000225925 2769 ntBASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Upk3bQ80YF6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Upk3bQ80YF6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Upk3bQ80YF6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Upk3bQ80YF6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3bQ80YF6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3bQ80YF6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Upk3bQ80YF6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms