Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.64■□□□□ 0.09
Prpf38bQ80SY5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Gm25287-201ENSMUST00000103846 110 ntBASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Gm22918-201ENSMUST00000103855 110 ntBASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Gm27306-201ENSMUST00000183970 107 ntBASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Gm7653-201ENSMUST00000214567 508 ntBASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Prpf38bQ80SY5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Gm18489-201ENSMUST00000172565 551 ntBASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Mir7684-201ENSMUST00000183858 60 ntBASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38bQ80SY5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Gm8344-201ENSMUST00000119813 856 ntBASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Gm28631-201ENSMUST00000190740 334 ntBASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms