Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sned1Q70E20 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sned1Q70E20 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sned1Q70E20 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.76■□□□□ 0.43
Sned1Q70E20 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.76■□□□□ 0.43
Sned1Q70E20 Gm21470-201ENSMUST00000187680 696 ntBASIC17.76■□□□□ 0.43
Sned1Q70E20 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sned1Q70E20 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sned1Q70E20 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sned1Q70E20 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sned1Q70E20 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.76■□□□□ 0.43
Sned1Q70E20 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sned1Q70E20 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sned1Q70E20 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sned1Q70E20 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sned1Q70E20 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sned1Q70E20 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.75■□□□□ 0.43
Sned1Q70E20 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.75■□□□□ 0.43
Sned1Q70E20 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.75■□□□□ 0.43
Sned1Q70E20 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sned1Q70E20 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sned1Q70E20 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sned1Q70E20 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sned1Q70E20 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.75■□□□□ 0.43
Sned1Q70E20 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sned1Q70E20 Gm24196-201ENSMUST00000179161 110 ntBASIC17.75■□□□□ 0.43
Sned1Q70E20 Gm27572-201ENSMUST00000183702 255 ntBASIC17.75■□□□□ 0.43
Sned1Q70E20 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Sned1Q70E20 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.75■□□□□ 0.43
Sned1Q70E20 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.75■□□□□ 0.43
Sned1Q70E20 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sned1Q70E20 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sned1Q70E20 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sned1Q70E20 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.75■□□□□ 0.43
Sned1Q70E20 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sned1Q70E20 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.75■□□□□ 0.43
Sned1Q70E20 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sned1Q70E20 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sned1Q70E20 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.74■□□□□ 0.43
Sned1Q70E20 Gm27514-201ENSMUST00000183692 110 ntBASIC17.74■□□□□ 0.43
Sned1Q70E20 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.74■□□□□ 0.43
Sned1Q70E20 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.74■□□□□ 0.43
Sned1Q70E20 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.74■□□□□ 0.43
Sned1Q70E20 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.74■□□□□ 0.43
Sned1Q70E20 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sned1Q70E20 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sned1Q70E20 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.73■□□□□ 0.43
Sned1Q70E20 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sned1Q70E20 Gm15429-201ENSMUST00000151268 798 ntBASIC17.73■□□□□ 0.43
Sned1Q70E20 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Sned1Q70E20 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sned1Q70E20 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.73■□□□□ 0.43
Sned1Q70E20 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.73■□□□□ 0.43
Sned1Q70E20 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sned1Q70E20 Gm18054-201ENSMUST00000207539 555 ntBASIC17.73■□□□□ 0.43
Sned1Q70E20 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.73■□□□□ 0.43
Sned1Q70E20 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.73■□□□□ 0.43
Sned1Q70E20 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sned1Q70E20 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sned1Q70E20 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sned1Q70E20 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sned1Q70E20 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sned1Q70E20 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sned1Q70E20 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sned1Q70E20 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sned1Q70E20 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.73■□□□□ 0.43
Sned1Q70E20 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sned1Q70E20 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sned1Q70E20 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sned1Q70E20 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sned1Q70E20 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.72■□□□□ 0.43
Sned1Q70E20 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.72■□□□□ 0.43
Sned1Q70E20 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.72■□□□□ 0.43
Sned1Q70E20 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.72■□□□□ 0.43
Sned1Q70E20 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.72■□□□□ 0.43
Sned1Q70E20 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.72■□□□□ 0.43
Sned1Q70E20 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.72■□□□□ 0.43
Sned1Q70E20 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.72■□□□□ 0.43
Sned1Q70E20 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.72■□□□□ 0.43
Sned1Q70E20 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sned1Q70E20 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sned1Q70E20 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sned1Q70E20 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sned1Q70E20 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sned1Q70E20 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Sned1Q70E20 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms