Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.44■□□□□ 0.54
Ddx58Q6Q899 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Mir7023-201ENSMUST00000185093 64 ntBASIC18.43■□□□□ 0.54
Ddx58Q6Q899 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.43■□□□□ 0.54
Ddx58Q6Q899 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx58Q6Q899 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Asic1-205ENSMUST00000228185 1818 ntBASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx58Q6Q899 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx58Q6Q899 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms