Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.56□□□□□ -0.4
Rif1Q6PR54 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.56□□□□□ -0.4
Rif1Q6PR54 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Gm24543-201ENSMUST00000103867 82 ntBASIC12.56□□□□□ -0.4
Rif1Q6PR54 Gm12384-201ENSMUST00000119228 919 ntBASIC12.56□□□□□ -0.4
Rif1Q6PR54 Gm22334-201ENSMUST00000158070 133 ntBASIC12.56□□□□□ -0.4
Rif1Q6PR54 Gm16026-204ENSMUST00000162652 683 ntBASIC12.56□□□□□ -0.4
Rif1Q6PR54 Gm18893-201ENSMUST00000198416 943 ntBASIC12.56□□□□□ -0.4
Rif1Q6PR54 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.55□□□□□ -0.4
Rif1Q6PR54 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.55□□□□□ -0.4
Rif1Q6PR54 Gm12341-201ENSMUST00000119724 503 ntBASIC12.55□□□□□ -0.4
Rif1Q6PR54 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.55□□□□□ -0.4
Rif1Q6PR54 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Gm46209-201ENSMUST00000217912 553 ntBASIC12.55□□□□□ -0.4
Rif1Q6PR54 Cts7-204ENSMUST00000225321 1257 ntBASIC12.55□□□□□ -0.4
Rif1Q6PR54 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rif1Q6PR54 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rif1Q6PR54 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.55□□□□□ -0.4
Rif1Q6PR54 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.55□□□□□ -0.4
Rif1Q6PR54 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Rarb-207ENSMUST00000225921 2756 ntBASIC12.54□□□□□ -0.4
Rif1Q6PR54 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.54□□□□□ -0.4
Rif1Q6PR54 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Gm43758-201ENSMUST00000199500 367 ntBASIC12.54□□□□□ -0.4
Rif1Q6PR54 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.54□□□□□ -0.4
Rif1Q6PR54 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.54□□□□□ -0.4
Rif1Q6PR54 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rif1Q6PR54 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Rps4l-202ENSMUST00000204242 789 ntBASIC12.53□□□□□ -0.4
Rif1Q6PR54 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rif1Q6PR54 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.53□□□□□ -0.4
Rif1Q6PR54 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.53□□□□□ -0.4
Rif1Q6PR54 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.53□□□□□ -0.4
Rif1Q6PR54 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms