Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf4Q6PFF0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Gm10499-201ENSMUST00000174094 934 ntBASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Gm23634-201ENSMUST00000175071 91 ntBASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Gm43767-201ENSMUST00000198933 381 ntBASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf4Q6PFF0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf4Q6PFF0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms