Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.4■□□□□ 0.38
Nup98Q6PFD9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nup98Q6PFD9 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Gm46209-201ENSMUST00000217912 553 ntBASIC17.4■□□□□ 0.38
Nup98Q6PFD9 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Syt7-205ENSMUST00000224135 1557 ntBASIC17.4■□□□□ 0.38
Nup98Q6PFD9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup98Q6PFD9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup98Q6PFD9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.4■□□□□ 0.38
Nup98Q6PFD9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nup98Q6PFD9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nup98Q6PFD9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nup98Q6PFD9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup98Q6PFD9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nup98Q6PFD9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup98Q6PFD9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.39■□□□□ 0.37
Nup98Q6PFD9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Nup98Q6PFD9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.39■□□□□ 0.37
Nup98Q6PFD9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.39■□□□□ 0.37
Nup98Q6PFD9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.39■□□□□ 0.37
Nup98Q6PFD9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.39■□□□□ 0.37
Nup98Q6PFD9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup98Q6PFD9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.39■□□□□ 0.37
Nup98Q6PFD9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nup98Q6PFD9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nup98Q6PFD9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup98Q6PFD9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Gm12859-201ENSMUST00000117834 427 ntBASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Gm5745-201ENSMUST00000183748 313 ntBASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Gm5186-201ENSMUST00000218781 920 ntBASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup98Q6PFD9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Gm6916-202ENSMUST00000205523 195 ntBASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup98Q6PFD9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup98Q6PFD9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms