Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf220Q6PDX6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Rnf220Q6PDX6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf220Q6PDX6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Rnf220Q6PDX6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf220Q6PDX6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf220Q6PDX6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf220Q6PDX6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf220Q6PDX6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Gm23547-201ENSMUST00000158210 271 ntBASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf220Q6PDX6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Gm37722-201ENSMUST00000193757 208 ntBASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf220Q6PDX6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Gm21559-201ENSMUST00000220638 855 ntBASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Gm8587-201ENSMUST00000076538 843 ntBASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf220Q6PDX6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms