Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chd4Q6PDQ2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chd4Q6PDQ2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Chd4Q6PDQ2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd4Q6PDQ2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Gm9797-201ENSMUST00000052902 613 ntBASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Gm6180-201ENSMUST00000065243 498 ntBASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd4Q6PDQ2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Gm15678-201ENSMUST00000117573 960 ntBASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Gm8515-201ENSMUST00000194852 576 ntBASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd4Q6PDQ2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Gm23984-201ENSMUST00000157139 203 ntBASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Gm18018-201ENSMUST00000198273 408 ntBASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Gm31326-201ENSMUST00000191856 1048 ntBASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chd4Q6PDQ2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms