Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.43■□□□□ 0.38
Smarcc2Q6PDG5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc2Q6PDG5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Gm2213-201ENSMUST00000197485 688 ntBASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc2Q6PDG5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc2Q6PDG5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.39■□□□□ 0.38
Smarcc2Q6PDG5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Smarcc2Q6PDG5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarcc2Q6PDG5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Smarcc2Q6PDG5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Smarcc2Q6PDG5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.39■□□□□ 0.38
Smarcc2Q6PDG5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Smarcc2Q6PDG5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms