Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Gm12895-201ENSMUST00000122214 226 ntBASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd3Q6P9Z1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd3Q6P9Z1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms