Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf6Q6NVF9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Gm13884-201ENSMUST00000118103 829 ntBASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Gm11764-201ENSMUST00000120221 623 ntBASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Gm45167-201ENSMUST00000208007 322 ntBASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Gm10060-201ENSMUST00000212002 111 ntBASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpsf6Q6NVF9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf6Q6NVF9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms