Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Gm15590-201ENSMUST00000078419 552 ntBASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sp140Q6NSQ5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sp140Q6NSQ5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms