Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Gm24513-201ENSMUST00000174964 138 ntBASIC15.7■□□□□ 0.1
Scube3Q66PY1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.7■□□□□ 0.1
Scube3Q66PY1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.7■□□□□ 0.1
Scube3Q66PY1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Thoc7-209ENSMUST00000225325 765 ntBASIC15.7■□□□□ 0.1
Scube3Q66PY1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scube3Q66PY1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.7■□□□□ 0.1
Scube3Q66PY1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.7■□□□□ 0.1
Scube3Q66PY1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Gm14822-201ENSMUST00000122247 291 ntBASIC15.69■□□□□ 0.1
Scube3Q66PY1 Gm16026-204ENSMUST00000162652 683 ntBASIC15.69■□□□□ 0.1
Scube3Q66PY1 Rpph1-201ENSMUST00000175096 319 ntBASIC15.69■□□□□ 0.1
Scube3Q66PY1 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Gm2756-201ENSMUST00000195851 400 ntBASIC15.69■□□□□ 0.1
Scube3Q66PY1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC15.69■□□□□ 0.1
Scube3Q66PY1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.69■□□□□ 0.1
Scube3Q66PY1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.69■□□□□ 0.1
Scube3Q66PY1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.69■□□□□ 0.1
Scube3Q66PY1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube3Q66PY1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scube3Q66PY1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.67■□□□□ 0.1
Scube3Q66PY1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scube3Q66PY1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.67■□□□□ 0.1
Scube3Q66PY1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.67■□□□□ 0.1
Scube3Q66PY1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube3Q66PY1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms