Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Zfp248Q640N4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Zfp248Q640N4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Zfp248Q640N4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Zfp248Q640N4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.39□□□□□ -0.59
Zfp248Q640N4 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.39□□□□□ -0.59
Zfp248Q640N4 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.39□□□□□ -0.59
Zfp248Q640N4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Zfp248Q640N4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.39□□□□□ -0.59
Zfp248Q640N4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Zfp248Q640N4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.39□□□□□ -0.59
Zfp248Q640N4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Zfp248Q640N4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Zfp248Q640N4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Zfp248Q640N4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.39□□□□□ -0.59
Zfp248Q640N4 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.39□□□□□ -0.59
Zfp248Q640N4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Zfp248Q640N4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.38□□□□□ -0.59
Zfp248Q640N4 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.38□□□□□ -0.59
Zfp248Q640N4 Gm18489-201ENSMUST00000172565 551 ntBASIC11.38□□□□□ -0.59
Zfp248Q640N4 Gm28033-201ENSMUST00000184224 96 ntBASIC11.38□□□□□ -0.59
Zfp248Q640N4 Gm21362-201ENSMUST00000194272 928 ntBASIC11.38□□□□□ -0.59
Zfp248Q640N4 Gm43347-201ENSMUST00000200226 580 ntBASIC11.38□□□□□ -0.59
Zfp248Q640N4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.38□□□□□ -0.59
Zfp248Q640N4 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.38□□□□□ -0.59
Zfp248Q640N4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.38□□□□□ -0.59
Zfp248Q640N4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Zfp248Q640N4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Zfp248Q640N4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm44357-201ENSMUST00000195897 142 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm19658-201ENSMUST00000196231 138 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm44367-201ENSMUST00000196836 138 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm44350-201ENSMUST00000197197 138 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm44390-201ENSMUST00000197533 144 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm44313-201ENSMUST00000198018 138 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm44486-201ENSMUST00000198508 138 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm44314-201ENSMUST00000199263 138 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm44394-201ENSMUST00000199558 138 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm44484-201ENSMUST00000199873 138 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm44466-201ENSMUST00000200264 138 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Gm44359-201ENSMUST00000200671 138 ntBASIC11.37□□□□□ -0.59
Zfp248Q640N4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Zfp248Q640N4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms