Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Six1Q62231 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Six1Q62231 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Six1Q62231 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Gm7222-201ENSMUST00000117512 906 ntBASIC15.33■□□□□ 0.04
Six1Q62231 Gm43347-201ENSMUST00000200226 580 ntBASIC15.33■□□□□ 0.04
Six1Q62231 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.33■□□□□ 0.04
Six1Q62231 Gm45167-201ENSMUST00000208007 322 ntBASIC15.33■□□□□ 0.04
Six1Q62231 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Six1Q62231 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Six1Q62231 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Six1Q62231 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.33■□□□□ 0.04
Six1Q62231 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Six1Q62231 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.33■□□□□ 0.04
Six1Q62231 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six1Q62231 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.32■□□□□ 0.04
Six1Q62231 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Six1Q62231 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.32■□□□□ 0.04
Six1Q62231 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Gm4899-201ENSMUST00000178708 719 ntBASIC15.32■□□□□ 0.04
Six1Q62231 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Six1Q62231 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Six1Q62231 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.32■□□□□ 0.04
Six1Q62231 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Six1Q62231 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Six1Q62231 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Six1Q62231 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.31■□□□□ 0.04
Six1Q62231 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Six1Q62231 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.31■□□□□ 0.04
Six1Q62231 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.31■□□□□ 0.04
Six1Q62231 Gm7230-201ENSMUST00000173026 815 ntBASIC15.31■□□□□ 0.04
Six1Q62231 Gm18246-201ENSMUST00000221023 728 ntBASIC15.31■□□□□ 0.04
Six1Q62231 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.31■□□□□ 0.04
Six1Q62231 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.31■□□□□ 0.04
Six1Q62231 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.31■□□□□ 0.04
Six1Q62231 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.31■□□□□ 0.04
Six1Q62231 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six1Q62231 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Six1Q62231 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.3■□□□□ 0.04
Six1Q62231 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Six1Q62231 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.3■□□□□ 0.04
Six1Q62231 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six1Q62231 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms