Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Foxc1Q61572 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.04□□□□□ -0.64
Foxc1Q61572 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.04□□□□□ -0.64
Foxc1Q61572 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Gm14722-201ENSMUST00000118943 689 ntBASIC11.04□□□□□ -0.64
Foxc1Q61572 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Gm27702-201ENSMUST00000184512 56 ntBASIC11.04□□□□□ -0.64
Foxc1Q61572 Gm37293-201ENSMUST00000191658 295 ntBASIC11.04□□□□□ -0.64
Foxc1Q61572 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.04□□□□□ -0.64
Foxc1Q61572 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Foxc1Q61572 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Foxc1Q61572 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Foxc1Q61572 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Foxc1Q61572 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Foxc1Q61572 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
Foxc1Q61572 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Foxc1Q61572 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Foxc1Q61572 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.03□□□□□ -0.64
Foxc1Q61572 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.03□□□□□ -0.64
Foxc1Q61572 Gm37153-201ENSMUST00000193637 231 ntBASIC11.03□□□□□ -0.64
Foxc1Q61572 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.03□□□□□ -0.64
Foxc1Q61572 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.03□□□□□ -0.64
Foxc1Q61572 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.03□□□□□ -0.64
Foxc1Q61572 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.03□□□□□ -0.64
Foxc1Q61572 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Foxc1Q61572 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.03□□□□□ -0.64
Foxc1Q61572 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms