Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.79□□□□□ -0.2
Clcn4Q61418 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn4Q61418 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.78□□□□□ -0.2
Clcn4Q61418 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.78□□□□□ -0.2
Clcn4Q61418 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Clcn4Q61418 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn4Q61418 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clcn4Q61418 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clcn4Q61418 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clcn4Q61418 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Clcn4Q61418 Gm1401-201ENSMUST00000122048 772 ntBASIC13.77□□□□□ -0.21
Clcn4Q61418 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.77□□□□□ -0.21
Clcn4Q61418 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.77□□□□□ -0.21
Clcn4Q61418 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clcn4Q61418 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Clcn4Q61418 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.77□□□□□ -0.21
Clcn4Q61418 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clcn4Q61418 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clcn4Q61418 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clcn4Q61418 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.77□□□□□ -0.21
Clcn4Q61418 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn4Q61418 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clcn4Q61418 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clcn4Q61418 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clcn4Q61418 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.76□□□□□ -0.21
Clcn4Q61418 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clcn4Q61418 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Clcn4Q61418 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clcn4Q61418 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clcn4Q61418 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clcn4Q61418 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clcn4Q61418 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clcn4Q61418 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms