Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ift88Q61371 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ift88Q61371 Gm11780-201ENSMUST00000136880 516 ntBASIC16.57■□□□□ 0.24
Ift88Q61371 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.57■□□□□ 0.24
Ift88Q61371 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.57■□□□□ 0.24
Ift88Q61371 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Ift88Q61371 Gm43767-201ENSMUST00000198933 381 ntBASIC16.57■□□□□ 0.24
Ift88Q61371 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ift88Q61371 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Ift88Q61371 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ift88Q61371 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.57■□□□□ 0.24
Ift88Q61371 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ift88Q61371 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ift88Q61371 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ift88Q61371 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Ift88Q61371 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ift88Q61371 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ift88Q61371 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.56■□□□□ 0.24
Ift88Q61371 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ift88Q61371 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ift88Q61371 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.56■□□□□ 0.24
Ift88Q61371 Gm23547-201ENSMUST00000158210 271 ntBASIC16.56■□□□□ 0.24
Ift88Q61371 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ift88Q61371 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ift88Q61371 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ift88Q61371 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.56■□□□□ 0.24
Ift88Q61371 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ift88Q61371 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ift88Q61371 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ift88Q61371 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ift88Q61371 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ift88Q61371 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ift88Q61371 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.56■□□□□ 0.24
Ift88Q61371 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ift88Q61371 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ift88Q61371 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.55■□□□□ 0.24
Ift88Q61371 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.55■□□□□ 0.24
Ift88Q61371 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ift88Q61371 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ift88Q61371 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ift88Q61371 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.55■□□□□ 0.24
Ift88Q61371 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ift88Q61371 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ift88Q61371 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.55■□□□□ 0.24
Ift88Q61371 Gm17807-201ENSMUST00000186869 298 ntBASIC16.55■□□□□ 0.24
Ift88Q61371 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.55■□□□□ 0.24
Ift88Q61371 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ift88Q61371 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ift88Q61371 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ift88Q61371 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ift88Q61371 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ift88Q61371 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ift88Q61371 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Ift88Q61371 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ift88Q61371 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ift88Q61371 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Ift88Q61371 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ift88Q61371 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ift88Q61371 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ift88Q61371 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.54■□□□□ 0.24
Ift88Q61371 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ift88Q61371 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ift88Q61371 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.54■□□□□ 0.24
Ift88Q61371 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.54■□□□□ 0.24
Ift88Q61371 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ift88Q61371 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ift88Q61371 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ift88Q61371 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Ift88Q61371 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ift88Q61371 Gm12008-201ENSMUST00000117791 755 ntBASIC16.53■□□□□ 0.24
Ift88Q61371 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.53■□□□□ 0.24
Ift88Q61371 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.53■□□□□ 0.24
Ift88Q61371 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ift88Q61371 Gm4535-201ENSMUST00000182274 558 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms