Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col12a1Q60847 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Gm5279-201ENSMUST00000199575 745 ntBASIC14.54□□□□□ -0.08
Col12a1Q60847 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col12a1Q60847 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.53□□□□□ -0.08
Col12a1Q60847 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col12a1Q60847 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col12a1Q60847 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col12a1Q60847 Gm4857-201ENSMUST00000192718 785 ntBASIC14.53□□□□□ -0.08
Col12a1Q60847 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col12a1Q60847 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col12a1Q60847 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.53□□□□□ -0.08
Col12a1Q60847 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col12a1Q60847 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.53□□□□□ -0.08
Col12a1Q60847 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Col12a1Q60847 Gm11814-201ENSMUST00000119515 929 ntBASIC14.53□□□□□ -0.08
Col12a1Q60847 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.53□□□□□ -0.08
Col12a1Q60847 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.53□□□□□ -0.08
Col12a1Q60847 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.53□□□□□ -0.08
Col12a1Q60847 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.53□□□□□ -0.08
Col12a1Q60847 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col12a1Q60847 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.53□□□□□ -0.08
Col12a1Q60847 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col12a1Q60847 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col12a1Q60847 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col12a1Q60847 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col12a1Q60847 Gm19309-201ENSMUST00000218295 205 ntBASIC14.52□□□□□ -0.08
Col12a1Q60847 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col12a1Q60847 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col12a1Q60847 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col12a1Q60847 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col12a1Q60847 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col12a1Q60847 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col12a1Q60847 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col12a1Q60847 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Col12a1Q60847 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col12a1Q60847 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col12a1Q60847 Gm12585-201ENSMUST00000117307 290 ntBASIC14.52□□□□□ -0.08
Col12a1Q60847 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Col12a1Q60847 Gm45930-201ENSMUST00000221330 292 ntBASIC14.52□□□□□ -0.08
Col12a1Q60847 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col12a1Q60847 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col12a1Q60847 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.52□□□□□ -0.09
Col12a1Q60847 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col12a1Q60847 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col12a1Q60847 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col12a1Q60847 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col12a1Q60847 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.52□□□□□ -0.09
Col12a1Q60847 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.52□□□□□ -0.09
Col12a1Q60847 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col12a1Q60847 Gm12384-201ENSMUST00000119228 919 ntBASIC14.52□□□□□ -0.09
Col12a1Q60847 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.52□□□□□ -0.09
Col12a1Q60847 Gm43118-201ENSMUST00000199149 775 ntBASIC14.52□□□□□ -0.09
Col12a1Q60847 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.52□□□□□ -0.09
Col12a1Q60847 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col12a1Q60847 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.52□□□□□ -0.09
Col12a1Q60847 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col12a1Q60847 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col12a1Q60847 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col12a1Q60847 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col12a1Q60847 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col12a1Q60847 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.51□□□□□ -0.09
Col12a1Q60847 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.51□□□□□ -0.09
Col12a1Q60847 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
Col12a1Q60847 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col12a1Q60847 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Col12a1Q60847 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.51□□□□□ -0.09
Col12a1Q60847 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.51□□□□□ -0.09
Col12a1Q60847 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.51□□□□□ -0.09
Col12a1Q60847 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col12a1Q60847 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Gm27514-201ENSMUST00000183692 110 ntBASIC14.5□□□□□ -0.09
Col12a1Q60847 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms