Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.36□□□□□ -0.11
ClpbQ60649 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ClpbQ60649 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ClpbQ60649 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ClpbQ60649 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClpbQ60649 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ClpbQ60649 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.35□□□□□ -0.11
ClpbQ60649 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
ClpbQ60649 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ClpbQ60649 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.35□□□□□ -0.11
ClpbQ60649 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ClpbQ60649 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClpbQ60649 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.34□□□□□ -0.11
ClpbQ60649 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ClpbQ60649 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.34□□□□□ -0.11
ClpbQ60649 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ClpbQ60649 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.34□□□□□ -0.11
ClpbQ60649 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Gm11594-201ENSMUST00000122313 162 ntBASIC14.34□□□□□ -0.11
ClpbQ60649 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.34□□□□□ -0.11
ClpbQ60649 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ClpbQ60649 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ClpbQ60649 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ClpbQ60649 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.34□□□□□ -0.11
ClpbQ60649 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClpbQ60649 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.34□□□□□ -0.11
ClpbQ60649 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ClpbQ60649 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ClpbQ60649 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.33□□□□□ -0.11
ClpbQ60649 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ClpbQ60649 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ClpbQ60649 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ClpbQ60649 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ClpbQ60649 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ClpbQ60649 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.33□□□□□ -0.12
ClpbQ60649 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClpbQ60649 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms