Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Grk6-205ENSMUST00000224653 2976 ntBASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Gm36967-201ENSMUST00000193814 266 ntBASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav3-1Q5R1I8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC10.07□□□□□ -0.8
Trav3-1Q5R1I8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms