Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Gm13015-201ENSMUST00000118674 204 ntBASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Gm12151-201ENSMUST00000121374 290 ntBASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-2Q5R1I4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Gm5866-201ENSMUST00000177881 973 ntBASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Gm27437-201ENSMUST00000183429 107 ntBASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Mir7684-201ENSMUST00000183858 60 ntBASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Gm5186-201ENSMUST00000218781 920 ntBASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-2Q5R1I4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6-2Q5R1I4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.08□□□□□ -0.31
Trav6-2Q5R1I4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.31
Trav6-2Q5R1I4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Gm29541-201ENSMUST00000191351 678 ntBASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Gm38294-201ENSMUST00000192831 381 ntBASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms