Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-4Q5R1I0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Trav6d-4Q5R1I0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 BC037039-201ENSMUST00000192003 2205 ntBASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-4Q5R1I0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Gm14701-201ENSMUST00000117156 348 ntBASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Gm44335-201ENSMUST00000196879 141 ntBASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Gm44297-201ENSMUST00000198304 141 ntBASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Gm44346-201ENSMUST00000198851 141 ntBASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Gm18057-201ENSMUST00000208220 503 ntBASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-4Q5R1I0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms