Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8d-1Q5R1H8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Gm9103-201ENSMUST00000119371 405 ntBASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8d-1Q5R1H8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav8d-1Q5R1H8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav8d-1Q5R1H8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav8d-1Q5R1H8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav8d-1Q5R1H8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav8d-1Q5R1H8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav8d-1Q5R1H8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Gm13312-201ENSMUST00000119631 718 ntBASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Ank2-226ENSMUST00000189368 339 ntBASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8d-1Q5R1H8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav8d-1Q5R1H8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms