Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5d-4Q5R1F6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Gm11764-201ENSMUST00000120221 623 ntBASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5d-4Q5R1F6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 AV026068-213ENSMUST00000223675 1171 ntBASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5d-4Q5R1F6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms