Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-3Q5R1E6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Gm37297-201ENSMUST00000192974 2384 ntBASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Gm42632-201ENSMUST00000201707 2411 ntBASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12□□□□□ -0.49
Trav6-3Q5R1E6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6-3Q5R1E6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Carlr-201ENSMUST00000181515 2574 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm44357-201ENSMUST00000195897 142 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm19658-201ENSMUST00000196231 138 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm44367-201ENSMUST00000196836 138 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm44350-201ENSMUST00000197197 138 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm44390-201ENSMUST00000197533 144 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm44313-201ENSMUST00000198018 138 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm44486-201ENSMUST00000198508 138 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm44314-201ENSMUST00000199263 138 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm44394-201ENSMUST00000199558 138 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm44484-201ENSMUST00000199873 138 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm44466-201ENSMUST00000200264 138 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm44359-201ENSMUST00000200671 138 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-3Q5R1E6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms