Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm8344-201ENSMUST00000119813 856 ntBASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm43799-201ENSMUST00000201845 579 ntBASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms