Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Gm26461-201ENSMUST00000175064 290 ntBASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Gm5187-201ENSMUST00000117317 991 ntBASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.15□□□□□ -0.14
Col27a1Q5QNQ9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Col27a1Q5QNQ9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Gm12928-201ENSMUST00000117115 573 ntBASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Col27a1Q5QNQ9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Gm15376-201ENSMUST00000122258 783 ntBASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Gm26083-201ENSMUST00000157904 193 ntBASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.13□□□□□ -0.15
Col27a1Q5QNQ9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms