Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Gm7774-201ENSMUST00000200064 533 ntBASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf223Q3UV31 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Gm18737-201ENSMUST00000173594 937 ntBASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Mir6956-201ENSMUST00000183598 62 ntBASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Gm37102-201ENSMUST00000195740 1105 ntBASIC14.48□□□□□ -0.09
Rnf223Q3UV31 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf223Q3UV31 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Gm24158-201ENSMUST00000175263 71 ntBASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Auts2-212ENSMUST00000178555 309 ntBASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Gm38225-201ENSMUST00000194001 393 ntBASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Gm10253-201ENSMUST00000194270 940 ntBASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms