Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc190Q3URK1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Gm27742-201ENSMUST00000184667 60 ntBASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Ccdc190Q3URK1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Rprl3-201ENSMUST00000157400 290 ntBASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc190Q3URK1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc190Q3URK1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms