Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Gm8396-201ENSMUST00000057361 823 ntBASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx6-3Q3UHX8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx6-3Q3UHX8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx6-3Q3UHX8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx6-3Q3UHX8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Nkx6-3Q3UHX8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx6-3Q3UHX8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-3Q3UHX8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Gm13464-201ENSMUST00000119418 935 ntBASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Gm11543-201ENSMUST00000120758 370 ntBASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Gm27920-201ENSMUST00000183953 96 ntBASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Gm43474-201ENSMUST00000196415 774 ntBASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Gm43125-201ENSMUST00000201724 730 ntBASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Sybu-209ENSMUST00000228639 4113 ntBASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-3Q3UHX8 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Gm2810-201ENSMUST00000118681 990 ntBASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms