Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.65□□□□□ -0.22
Spg11Q3UHA3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Gm44608-201ENSMUST00000206827 855 ntBASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Gm45865-201ENSMUST00000211815 945 ntBASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Gm5363-201ENSMUST00000211927 938 ntBASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Spg11Q3UHA3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Gm13342-201ENSMUST00000121055 207 ntBASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.63□□□□□ -0.23
Spg11Q3UHA3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Gm24644-201ENSMUST00000157114 139 ntBASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Gm22334-201ENSMUST00000158070 133 ntBASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Gm24514-201ENSMUST00000174961 285 ntBASIC13.62□□□□□ -0.23
Spg11Q3UHA3 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.62□□□□□ -0.23
Spg11Q3UHA3 Gm33320-201ENSMUST00000192232 530 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms