Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Efs-202ENSMUST00000227037 2540 ntBASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Brf2Q3UAW9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Brf2Q3UAW9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Brf2Q3UAW9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Brf2Q3UAW9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Brf2Q3UAW9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Brf2Q3UAW9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Brf2Q3UAW9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Gm18195-201ENSMUST00000207604 706 ntBASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf2Q3UAW9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Gm18246-201ENSMUST00000221023 728 ntBASIC14.07□□□□□ -0.16
Brf2Q3UAW9 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Brf2Q3UAW9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Gm13036-201ENSMUST00000117799 748 ntBASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf2Q3UAW9 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.06□□□□□ -0.16
Brf2Q3UAW9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms