Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col5a2Q3U962 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col5a2Q3U962 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.52■□□□□ 0.4
Col5a2Q3U962 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Mir1247-201ENSMUST00000116706 82 ntBASIC17.52■□□□□ 0.4
Col5a2Q3U962 Gm12585-201ENSMUST00000117307 290 ntBASIC17.52■□□□□ 0.4
Col5a2Q3U962 Gm12742-201ENSMUST00000117326 410 ntBASIC17.52■□□□□ 0.4
Col5a2Q3U962 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 AA619741-201ENSMUST00000195095 646 ntBASIC17.52■□□□□ 0.4
Col5a2Q3U962 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.52■□□□□ 0.4
Col5a2Q3U962 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col5a2Q3U962 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col5a2Q3U962 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col5a2Q3U962 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.51■□□□□ 0.39
Col5a2Q3U962 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col5a2Q3U962 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col5a2Q3U962 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Col5a2Q3U962 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col5a2Q3U962 Mir1894-201ENSMUST00000122802 81 ntBASIC17.51■□□□□ 0.39
Col5a2Q3U962 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col5a2Q3U962 Gm27892-201ENSMUST00000185017 106 ntBASIC17.51■□□□□ 0.39
Col5a2Q3U962 Olfr286-202ENSMUST00000205305 969 ntBASIC17.51■□□□□ 0.39
Col5a2Q3U962 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Col5a2Q3U962 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.51■□□□□ 0.39
Col5a2Q3U962 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col5a2Q3U962 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col5a2Q3U962 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col5a2Q3U962 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col5a2Q3U962 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.51■□□□□ 0.39
Col5a2Q3U962 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col5a2Q3U962 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col5a2Q3U962 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.5■□□□□ 0.39
Col5a2Q3U962 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Gm5356-201ENSMUST00000093326 615 ntBASIC17.5■□□□□ 0.39
Col5a2Q3U962 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.5■□□□□ 0.39
Col5a2Q3U962 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col5a2Q3U962 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col5a2Q3U962 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Gm2495-201ENSMUST00000191160 466 ntBASIC17.5■□□□□ 0.39
Col5a2Q3U962 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col5a2Q3U962 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms