Protein–RNA interactions for Protein: Q3U6N9

UPF0488 protein C8orf33 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U6N9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Q3U6N9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U6N9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Q3U6N9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U6N9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U6N9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U6N9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U6N9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U6N9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Q3U6N9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U6N9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Q3U6N9 Gm13464-201ENSMUST00000119418 935 ntBASIC14.18□□□□□ -0.14
Q3U6N9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.18□□□□□ -0.14
Q3U6N9 Mir8102-201ENSMUST00000184148 139 ntBASIC14.18□□□□□ -0.14
Q3U6N9 Gm6888-201ENSMUST00000221983 706 ntBASIC14.18□□□□□ -0.14
Q3U6N9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.18□□□□□ -0.14
Q3U6N9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U6N9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Q3U6N9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.18□□□□□ -0.14
Q3U6N9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Q3U6N9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U6N9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U6N9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Q3U6N9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U6N9 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.18□□□□□ -0.14
Q3U6N9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.18□□□□□ -0.14
Q3U6N9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Q3U6N9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.17□□□□□ -0.14
Q3U6N9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.17□□□□□ -0.14
Q3U6N9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Gm45098-201ENSMUST00000207179 657 ntBASIC14.17□□□□□ -0.14
Q3U6N9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Q3U6N9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.17□□□□□ -0.14
Q3U6N9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U6N9 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.16□□□□□ -0.14
Q3U6N9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Q3U6N9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.16□□□□□ -0.14
Q3U6N9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.16□□□□□ -0.14
Q3U6N9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.16□□□□□ -0.14
Q3U6N9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Q3U6N9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.16□□□□□ -0.14
Q3U6N9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.16□□□□□ -0.14
Q3U6N9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Q3U6N9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.16□□□□□ -0.14
Q3U6N9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.16□□□□□ -0.14
Q3U6N9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.16□□□□□ -0.14
Q3U6N9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U6N9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U6N9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U6N9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Q3U6N9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Q3U6N9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U6N9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U6N9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U6N9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U6N9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U6N9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.15□□□□□ -0.14
Q3U6N9 Gm5566-201ENSMUST00000116118 459 ntBASIC14.15□□□□□ -0.14
Q3U6N9 Gm14767-201ENSMUST00000121559 586 ntBASIC14.15□□□□□ -0.14
Q3U6N9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U6N9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U6N9 Gm27989-201ENSMUST00000184721 107 ntBASIC14.15□□□□□ -0.14
Q3U6N9 Mir6977-201ENSMUST00000184960 64 ntBASIC14.15□□□□□ -0.14
Q3U6N9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U6N9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.15□□□□□ -0.14
Q3U6N9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.15□□□□□ -0.14
Q3U6N9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U6N9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U6N9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms