Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Q3U1D9 Gm25948-201ENSMUST00000175334 112 ntBASIC12.98□□□□□ -0.33
Q3U1D9 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.98□□□□□ -0.33
Q3U1D9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.98□□□□□ -0.33
Q3U1D9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.98□□□□□ -0.33
Q3U1D9 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.98□□□□□ -0.33
Q3U1D9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Q3U1D9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3U1D9 Celf4-206ENSMUST00000224553 1729 ntBASIC12.98□□□□□ -0.33
Q3U1D9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Q3U1D9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3U1D9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3U1D9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3U1D9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3U1D9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3U1D9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3U1D9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3U1D9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.98□□□□□ -0.33
Q3U1D9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.98□□□□□ -0.33
Q3U1D9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Q3U1D9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.97□□□□□ -0.33
Q3U1D9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.97□□□□□ -0.33
Q3U1D9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.97□□□□□ -0.33
Q3U1D9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.97□□□□□ -0.33
Q3U1D9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.97□□□□□ -0.33
Q3U1D9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Q3U1D9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Q3U1D9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Q3U1D9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Q3U1D9 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.96□□□□□ -0.33
Q3U1D9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Q3U1D9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Q3U1D9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Q3U1D9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.96□□□□□ -0.33
Q3U1D9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.96□□□□□ -0.33
Q3U1D9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Q3U1D9 Gm2810-201ENSMUST00000118681 990 ntBASIC12.96□□□□□ -0.33
Q3U1D9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.96□□□□□ -0.33
Q3U1D9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Q3U1D9 Gm38225-201ENSMUST00000194001 393 ntBASIC12.96□□□□□ -0.33
Q3U1D9 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.96□□□□□ -0.33
Q3U1D9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.96□□□□□ -0.33
Q3U1D9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Q3U1D9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Q3U1D9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.96□□□□□ -0.34
Q3U1D9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Q3U1D9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Q3U1D9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Q3U1D9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.96□□□□□ -0.34
Q3U1D9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Q3U1D9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Q3U1D9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Q3U1D9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Q3U1D9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Q3U1D9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.95□□□□□ -0.34
Q3U1D9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Q3U1D9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Q3U1D9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Q3U1D9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms