Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Gm28033-201ENSMUST00000184224 96 ntBASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Gm9172-201ENSMUST00000212092 954 ntBASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.78□□□□□ -0.36
Fndc4Q3TR08 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.77□□□□□ -0.36
Fndc4Q3TR08 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fndc4Q3TR08 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fndc4Q3TR08 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.77□□□□□ -0.36
Fndc4Q3TR08 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Fndc4Q3TR08 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Gm27867-201ENSMUST00000184778 125 ntBASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fndc4Q3TR08 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm8825-201ENSMUST00000182565 998 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm4518-201ENSMUST00000182638 718 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms