Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.87■□□□□ 0.13
Trim43aQ3TL54 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.87■□□□□ 0.13
Trim43aQ3TL54 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43aQ3TL54 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43aQ3TL54 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Trim43aQ3TL54 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43aQ3TL54 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43aQ3TL54 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim43aQ3TL54 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43aQ3TL54 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43aQ3TL54 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim43aQ3TL54 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Gm15358-201ENSMUST00000119249 520 ntBASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.86■□□□□ 0.13
Trim43aQ3TL54 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Birc2-201ENSMUST00000054878 378 ntBASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.86■□□□□ 0.13
Trim43aQ3TL54 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim43aQ3TL54 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Gm12895-201ENSMUST00000122214 226 ntBASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43aQ3TL54 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Gm7506-201ENSMUST00000207758 815 ntBASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms