Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Gm18669-201ENSMUST00000216049 778 ntBASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ptchd3Q0EEE2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ptchd3Q0EEE2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ptchd3Q0EEE2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ptchd3Q0EEE2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Ptchd3Q0EEE2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ptchd3Q0EEE2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ptchd3Q0EEE2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ptchd3Q0EEE2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ptchd3Q0EEE2 Carlr-201ENSMUST00000181515 2574 ntBASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ptchd3Q0EEE2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.44□□□□□ -0.1
Ptchd3Q0EEE2 Gm8825-201ENSMUST00000182565 998 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms