Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.25□□□□□ -0.29
Chd8Q09XV5 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Gm43133-201ENSMUST00000197472 463 ntBASIC13.25□□□□□ -0.29
Chd8Q09XV5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm12208-201ENSMUST00000122004 163 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm13297-201ENSMUST00000120205 934 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm29310-201ENSMUST00000185468 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21825-201ENSMUST00000185728 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm29109-201ENSMUST00000185895 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21896-201ENSMUST00000186520 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21873-201ENSMUST00000186728 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21794-201ENSMUST00000187056 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21880-201ENSMUST00000187275 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21826-201ENSMUST00000187451 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21198-201ENSMUST00000188393 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21749-201ENSMUST00000189343 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21901-201ENSMUST00000189568 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm29424-201ENSMUST00000189716 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm28599-201ENSMUST00000189838 694 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21867-201ENSMUST00000189917 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm29269-201ENSMUST00000190087 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21722-201ENSMUST00000190153 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm28423-201ENSMUST00000190701 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21899-201ENSMUST00000190745 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21910-201ENSMUST00000191163 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21849-201ENSMUST00000191571 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm28678-201ENSMUST00000191593 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm20910-201ENSMUST00000193268 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gm21871-201ENSMUST00000194621 696 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.24□□□□□ -0.29
Chd8Q09XV5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Chd8Q09XV5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.23□□□□□ -0.29
Chd8Q09XV5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Gm1335-201ENSMUST00000121653 386 ntBASIC13.23□□□□□ -0.29
Chd8Q09XV5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.23□□□□□ -0.29
Chd8Q09XV5 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.23□□□□□ -0.29
Chd8Q09XV5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Gm24990-201ENSMUST00000157406 323 ntBASIC13.23□□□□□ -0.29
Chd8Q09XV5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd8Q09XV5 Gm4804-201ENSMUST00000182234 999 ntBASIC13.23□□□□□ -0.29
Chd8Q09XV5 Gm27320-201ENSMUST00000184892 109 ntBASIC13.23□□□□□ -0.29
Chd8Q09XV5 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.23□□□□□ -0.29
Chd8Q09XV5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms