Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf4Q06507 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Atf4Q06507 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf4Q06507 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf4Q06507 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf4Q06507 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atf4Q06507 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Atf4Q06507 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Atf4Q06507 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.26□□□□□ -0.13
Atf4Q06507 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Atf4Q06507 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Gm15427-201ENSMUST00000117288 531 ntBASIC14.26□□□□□ -0.13
Atf4Q06507 Gm15358-201ENSMUST00000119249 520 ntBASIC14.26□□□□□ -0.13
Atf4Q06507 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.26□□□□□ -0.13
Atf4Q06507 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.26□□□□□ -0.13
Atf4Q06507 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.26□□□□□ -0.13
Atf4Q06507 CT009495.1-201ENSMUST00000224221 862 ntBASIC14.26□□□□□ -0.13
Atf4Q06507 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.26□□□□□ -0.13
Atf4Q06507 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf4Q06507 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Atf4Q06507 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Atf4Q06507 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Atf4Q06507 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Atf4Q06507 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.25□□□□□ -0.13
Atf4Q06507 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.25□□□□□ -0.13
Atf4Q06507 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
Atf4Q06507 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.25□□□□□ -0.13
Atf4Q06507 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.25□□□□□ -0.13
Atf4Q06507 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Atf4Q06507 Gm7787-201ENSMUST00000216858 688 ntBASIC14.25□□□□□ -0.13
Atf4Q06507 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Atf4Q06507 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.25□□□□□ -0.13
Atf4Q06507 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Atf4Q06507 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.25□□□□□ -0.13
Atf4Q06507 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.25□□□□□ -0.13
Atf4Q06507 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.25□□□□□ -0.13
Atf4Q06507 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf4Q06507 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Atf4Q06507 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.24□□□□□ -0.13
Atf4Q06507 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.24□□□□□ -0.13
Atf4Q06507 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.24□□□□□ -0.13
Atf4Q06507 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.24□□□□□ -0.13
Atf4Q06507 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Atf4Q06507 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Atf4Q06507 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.24□□□□□ -0.13
Atf4Q06507 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.24□□□□□ -0.13
Atf4Q06507 Gm13365-201ENSMUST00000121188 973 ntBASIC14.24□□□□□ -0.13
Atf4Q06507 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Gm18489-201ENSMUST00000172565 551 ntBASIC14.24□□□□□ -0.13
Atf4Q06507 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.24□□□□□ -0.13
Atf4Q06507 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms