Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcr5Q04683 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.24□□□□□ -0.13
Cxcr5Q04683 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.24□□□□□ -0.13
Cxcr5Q04683 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcr5Q04683 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Cxcr5Q04683 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Gm12008-201ENSMUST00000117791 755 ntBASIC14.23□□□□□ -0.13
Cxcr5Q04683 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.23□□□□□ -0.13
Cxcr5Q04683 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcr5Q04683 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cxcr5Q04683 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.22□□□□□ -0.13
Cxcr5Q04683 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cxcr5Q04683 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms